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研究生: 蘇哲民
Su, Jhe-Min
論文名稱: 基於影像資料之植物葉片計算表型分析
Image-data-based Computational Plant Leaf Phenotyping
指導教授: 周珮婷
謝復興
口試委員: 薛慧敏
學位類別: 碩士
Master
系所名稱: 商學院 - 統計學系
Department of Statistics
論文出版年: 2026
畢業學年度: 114
語文別: 中文
論文頁數: 72
中文關鍵詞: 葉片表型分析葉片輪廓分析葉脈結構分析特徵萃取階層式分群植物影像分析
外文關鍵詞: Leaf Phenotyping, Leaf Outline Analysis, Leaf Vein Structure Analysis, Feature Extraction, Hierarchical Clustering, Plant Image Analysis
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  • 本研究以 Swedish Leaf Dataset 與 Flavia Dataset 為研究對象,建立一套以資料驅動為核心之植物葉片表型分析架構,研究主要從葉片輪廓與葉脈兩個層面探討植物形態特徵,藉由建立可量化且具解釋性的結構化特徵表示,進一步辨識不同葉種之典型表型。
    在 Swedish Leaf Dataset 部分,利用葉片輪廓之質心輪廓距離曲線作為分析基礎,透過非參數離散化、直方圖表徵以及階層式聚類方法,重建葉片輪廓之結構依存關係,並辨識具有代表性的局部輪廓特徵與類別專屬表型。進一步藉由樹狀結構分析與局部拓撲視覺化,呈現不同葉種之間的同質性與異質性關係。
    在 Flavia Dataset 部分,由原始葉片影像出發,透過影像前處理、葉脈萃取與葉脈追蹤技術,建立半圓極座標系統以描述葉脈結構,於此座標系統下,進一步量測葉脈角度、葉脈長度、葉尖位置與葉谷位置等幾何特徵,並建構可供比較之葉脈表型結構。
    本研究建立了結合葉片輪廓與葉脈資訊之植物表型分析流程,將原本高維度且複雜的葉片影像資料轉換為具有生物意義之結構化特徵。研究結果顯示,透過輪廓與葉脈特徵之依存關係分析,可有效建構葉種專屬表型集合,並提供植物分類、形態分析以及未來表型與基因型關聯研究之基礎。


    This study develops a data-driven phenotyping framework for plant leaves using the Swedish Leaf Dataset and the Flavia Dataset. For the Swedish Leaf Dataset, leaf outlines represented by Centroid-Contour Distance curves are analyzed through nonparametric discretization and hierarchical clustering to identify characteristic contour features and species-specific phenotypes. For the Flavia Dataset, leaf vein structures are extracted from original leaf images through image preprocessing, vein extraction, and vein-tracing techniques. A half-circle polar coordinate system is further established to quantify geometric features, including vein angles, vein lengths, leaf-tip locations, and valley locations.
    By integrating leaf-outline and leaf-vein information, the proposed framework transforms complex leaf-image data into interpretable structural features and constructs species-specific phenotype collections. The results provide a foundation for plant classification, morphological analysis, and future studies on phenotype-genotype associations.

    第一章 緒論 1
    第一節 研究動機與目的 1
    第二節 資料介紹 4
    1-2-1 Swedish Leaf Dataset 4
    1-2-2 Flavia Dataset 6
    第二章 文獻探討 8
    第三章 研究方法 10
    第一節 研究流程概述 10
    第二節 Swedish Leaf Dataset 11
    3-2-1 葉片輪廓表徵與特徵符號化編碼 11
    3-2-1-1 資料表示與符號定義 11
    3-2-1-2 非參數離散化與類別編碼矩陣 11
    3-2-1-3 類別層級直方圖統計表徵 13
    3-2-2 類別兩兩比較與15 Classes HC-tree 建構 14
    3-2-2-1 類別兩兩比較與Histogram Overlap Area 15
    3-2-2-2 類別間結構距離 16
    3-2-2-3 Ward-D2階層式分群與15 Classes HC-tree 18
    3-2-3 Genus-level Grouping 與Branch-level Analysis 20
    3-2-3-1 Genus-level Grouping 20
    3-2-3-2 Genus-vs-Genus Branch-level Contingency Table 20
    3-2-3-3 屬內細部分類 22
    第三節 Flavia Dataset 22
    3-3-1 葉片影像前處理 22
    3-3-2 特徵萃取-葉片輪廓 28
    3-3-3 特徵萃取葉脈 30
    3-3-3-1 Class-8 30
    3-3-3-2 Class-32 34
    第四章 資料分析結果 39
    第一節 類別層級直方圖統計表徵與HC-tree 結構一致性 39
    第二節 Genus-level Grouping 與 Branch-level Analysis 41
    4-2-1 比較(1,3,9)與(2,8,12) 41
    4-2-2 比較 (1,3,9)與(7,11) 44
    4-2-3 屬內(7,11) 46
    第三節 Flavia Dataset 47
    4-3-1 Class-8特徵萃取 47
    4-3-2 Class-32特徵萃取 57
    第五章 結論與建議 68
    第一節 研究結論 68
    第二節 研究限制與未來研究方向 69
    參考文獻 71

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